Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen oxidase | SAMN03003324_00185 | Not Available | Negative | 198314 - 199207 | 34228.1 |
| protein of unknown function | SAMN03003324_00186 | Not Available | Positive | 199465 - 199917 | 17321.2 |
| putative dna-binding domain-containing protein | SAMN03003324_00187 | Not Available | Positive | 199939 - 200571 | 24173.2 |
| multidrug resistance protein, mate family | SAMN03003324_00188 | Not Available | Positive | 200600 - 201961 | 49187.7 |
| hypothetical protein | SAMN03003324_00189 | Not Available | Positive | 202035 - 203228 | 45117.1 |
| hypothetical protein | SAMN03003324_00190 | Not Available | Negative | 203318 - 203650 | 12917.5 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN03003324_00191 | Not Available | Negative | 203709 - 207110 | 128895.0 |
| dna polymerase-4 | SAMN03003324_00192 | Not Available | Positive | 207222 - 208307 | 40354.7 |
| uncharacterized conserved protein | SAMN03003324_00193 | Not Available | Negative | 208297 - 209484 | 44544.3 |
| protein of unknown function | SAMN03003324_00194 | Not Available | Positive | 209561 - 209758 | 7673.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

