Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | SAMN03003324_02465 | Not Available | Positive | 2660071 - 2661306 | 45349.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_02466 | Not Available | Positive | 2661337 - 2664525 | 116304.0 |
| starch-binding associating with outer membrane | SAMN03003324_02467 | Not Available | Positive | 2664570 - 2665997 | 53310.3 |
| hypothetical protein | SAMN03003324_02468 | Not Available | Negative | 2666064 - 2667419 | 51944.7 |
| regulator of nucleoside diphosphate kinase | SAMN03003324_02469 | Not Available | Positive | 2668038 - 2668448 | 15297.7 |
| wd40-like beta propeller repeat | SAMN03003324_02470 | Not Available | Positive | 2668590 - 2671007 | 89418.3 |
| pas domain s-box-containing protein | SAMN03003324_02471 | Not Available | Positive | 2671202 - 2672908 | 64003.8 |
| acetyl esterase/lipase | SAMN03003324_02472 | Not Available | Negative | 2672946 - 2673926 | 35817.6 |
| osmotically inducible protein osmc | SAMN03003324_02473 | Not Available | Negative | 2673990 - 2674493 | 18442.3 |
| hypothetical protein | SAMN03003324_02474 | Not Available | Positive | 2674601 - 2675497 | 33393.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

