Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02455 | Not Available | Positive | 2650057 - 2651382 | 48161.1 |
| hypothetical protein | SAMN03003324_02456 | Not Available | Positive | 2651382 - 2651954 | 21101.3 |
| peptidyl-prolyl cis-trans isomerase d | SAMN03003324_02457 | Not Available | Positive | 2652082 - 2654178 | 75982.5 |
| protein of unknown function | SAMN03003324_02458 | Not Available | Positive | 2654243 - 2654758 | 19327.5 |
| protein of unknown function | SAMN03003324_02459 | Not Available | Positive | 2654806 - 2655567 | 28868.8 |
| protein of unknown function | SAMN03003324_02460 | Not Available | Positive | 2655571 - 2656137 | 21147.1 |
| glucose-1-phosphate thymidylyltransferase | SAMN03003324_02461 | Not Available | Positive | 2656214 - 2657014 | 29186.4 |
| xaa-pro aminopeptidase | SAMN03003324_02462 | Not Available | Negative | 2657114 - 2658889 | 65457.1 |
| hypothetical protein | SAMN03003324_02463 | Not Available | Positive | 2659057 - 2659353 | 11202.8 |
| rhodanese-related sulfurtransferase | SAMN03003324_02464 | Not Available | Positive | 2659363 - 2659659 | 10911.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

