Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylate-amine ligase | SAMN03003324_02425 | Not Available | Negative | 2618507 - 2619610 | 42153.4 |
| hypothetical protein | SAMN03003324_02426 | Not Available | Negative | 2619646 - 2620668 | 38823.1 |
| esterase/lipase superfamily enzyme | SAMN03003324_02427 | Not Available | Negative | 2620728 - 2621441 | 27514.4 |
| enterochelin esterase | SAMN03003324_02428 | Not Available | Positive | 2621604 - 2622401 | 29739.5 |
| nad dependent epimerase/dehydratase family protein | SAMN03003324_02429 | Not Available | Negative | 2622412 - 2623074 | 24986.6 |
| hypothetical protein | SAMN03003324_02430 | Not Available | Positive | 2623203 - 2623349 | 5780.01 |
| gtp-binding protein | SAMN03003324_02431 | Not Available | Positive | 2623309 - 2625114 | 67364.5 |
| 3',5'-cyclic-nucleotide phosphodiesterase | SAMN03003324_02432 | Not Available | Positive | 2625268 - 2626230 | 35657.0 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN03003324_02433 | Not Available | Positive | 2626287 - 2629559 | 120207.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN03003324_02434 | Not Available | Positive | 2629708 - 2630424 | 25479.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

