Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane transport energization protein exbd (tc 2.c.1.1.1) | SAMN03003324_02395 | Not Available | Positive | 2592493 - 2593029 | 19402.8 |
| protein tonb | SAMN03003324_02396 | Not Available | Positive | 2593060 - 2593881 | 30024.3 |
| hypothetical protein | SAMN03003324_02397 | Not Available | Positive | 2593892 - 2594119 | 9008.46 |
| phosphate abc transporter substrate-binding protein, phot family (tc 3.a.1.7.1) | SAMN03003324_02398 | Not Available | Positive | 2594172 - 2595083 | 33915.2 |
| tetratricopeptide repeat-containing protein | SAMN03003324_02399 | Not Available | Positive | 2595208 - 2596929 | 63161.3 |
| nadh dehydrogenase subunit a | SAMN03003324_02400 | Not Available | Positive | 2597009 - 2597380 | 14004.5 |
| nadh-quinone oxidoreductase subunit b | SAMN03003324_02401 | Not Available | Positive | 2597456 - 2598028 | 20870.2 |
| nadh dehydrogenase subunit c | SAMN03003324_02402 | Not Available | Positive | 2598028 - 2598528 | 19169.9 |
| nadh-quinone oxidoreductase subunit d | SAMN03003324_02403 | Not Available | Positive | 2598533 - 2599747 | 46163.1 |
| nadh dehydrogenase subunit e | SAMN03003324_02404 | Not Available | Positive | 2599740 - 2600252 | 19118.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

