Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00175 | Not Available | Negative | 184727 - 185752 | 38948.9 |
| wbqc-like protein family protein | SAMN03003324_00176 | Not Available | Positive | 185855 - 186469 | 24582.4 |
| magnesium transporter | SAMN03003324_00177 | Not Available | Positive | 186473 - 187591 | 43476.9 |
| magnesium transporter | SAMN03003324_00178 | Not Available | Positive | 187597 - 188946 | 49915.4 |
| peroxiredoxin, ohr subfamily | SAMN03003324_00179 | Not Available | Negative | 189020 - 189430 | 14232.6 |
| tigr01666 family membrane protein | SAMN03003324_00180 | Not Available | Negative | 189476 - 191638 | 82829.5 |
| mfs transporter, dha1 family, tetracycline resistance protein | SAMN03003324_00181 | Not Available | Negative | 191722 - 192936 | 43099.6 |
| tetratricopeptide repeat-containing protein | SAMN03003324_00182 | Not Available | Negative | 193192 - 194343 | 43719.1 |
| tetratricopeptide repeat-containing protein | SAMN03003324_00183 | Not Available | Negative | 194426 - 195505 | 40157.7 |
| dna gyrase subunit a | SAMN03003324_00184 | Not Available | Negative | 195606 - 198215 | 97767.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

