Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted outer membrane protein | SAMN03003324_02385 | Not Available | Positive | 2581150 - 2581812 | 23841.3 |
| hypothetical protein | SAMN03003324_02386 | Not Available | Negative | 2581860 - 2582555 | 25692.1 |
| iron complex outermembrane recepter protein | SAMN03003324_02387 | Not Available | Negative | 2582586 - 2585075 | 92446.2 |
| hypothetical protein | SAMN03003324_02388 | Not Available | Negative | 2585694 - 2586059 | 13904.6 |
| methionine adenosyltransferase | SAMN03003324_02389 | Not Available | Negative | 2586192 - 2587460 | 46437.1 |
| lipid kinase, yegs/rv2252/bmru family | SAMN03003324_02390 | Not Available | Positive | 2587695 - 2588591 | 32923.1 |
| translation initiation factor 1 | SAMN03003324_02391 | Not Available | Positive | 2588605 - 2588958 | 12734.5 |
| phosphoenolpyruvate carboxykinase (atp) | SAMN03003324_02392 | Not Available | Positive | 2589092 - 2590693 | 58544.8 |
| outer membrane transport energization protein exbb | SAMN03003324_02393 | Not Available | Positive | 2590960 - 2591787 | 28985.4 |
| outer membrane transport energization protein exbd (tc 2.c.1.1.1) | SAMN03003324_02394 | Not Available | Positive | 2591873 - 2592481 | 22406.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

