Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas/pac sensor signal transduction histidine kinase | SAMN03003324_02375 | Not Available | Positive | 2569847 - 2571601 | 66524.3 |
| hypothetical protein | SAMN03003324_02376 | Not Available | Negative | 2571637 - 2572293 | 25091.3 |
| hypothetical protein | SAMN03003324_02377 | Not Available | Negative | 2572290 - 2573372 | 41739.1 |
| uncharacterized iron-regulated membrane protein | SAMN03003324_02378 | Not Available | Negative | 2573650 - 2574777 | 42919.4 |
| hypothetical protein | SAMN03003324_02379 | Not Available | Negative | 2574858 - 2576087 | 44869.1 |
| outer membrane receptor proteins, mostly fe transport | SAMN03003324_02380 | Not Available | Negative | 2576110 - 2578497 | 88899.1 |
| arsenite transporter, acr3 family | SAMN03003324_02381 | Not Available | Negative | 2578653 - 2579714 | 38902.7 |
| arsenate reductase | SAMN03003324_02382 | Not Available | Negative | 2579750 - 2580172 | 15716.5 |
| hypothetical protein | SAMN03003324_02383 | Not Available | Negative | 2580172 - 2580603 | 15449.1 |
| regulatory protein, arsr family | SAMN03003324_02384 | Not Available | Negative | 2580645 - 2581043 | 14542.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

