Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02365 | Not Available | Positive | 2559912 - 2560319 | 15175.9 |
| acetylornithine deacetylase | SAMN03003324_02366 | Not Available | Positive | 2560478 - 2560795 | 12175.7 |
| peptidase dimerisation domain-containing protein | SAMN03003324_02367 | Not Available | Positive | 2560776 - 2561306 | 19509.4 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN03003324_02368 | Not Available | Positive | 2561534 - 2562868 | 50245.0 |
| f subunit of k+-transporting atpase (potass_kdpf) | SAMN03003324_02369 | Not Available | Positive | 2562920 - 2563204 | 11131.9 |
| k+-transporting atpase atpase a chain | SAMN03003324_02370 | Not Available | Positive | 2563214 - 2564932 | 62458.0 |
| k+-transporting atpase atpase b chain | SAMN03003324_02371 | Not Available | Positive | 2564943 - 2566973 | 71642.9 |
| k+-transporting atpase atpase c chain | SAMN03003324_02372 | Not Available | Positive | 2566986 - 2567573 | 20641.9 |
| putative beta-barrel porin-2, ompl-like. bbp2 | SAMN03003324_02373 | Not Available | Positive | 2567593 - 2568663 | 39276.3 |
| two-component system, ompr family, sensor histidine kinase kdpd | SAMN03003324_02374 | Not Available | Positive | 2568696 - 2569829 | 42771.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

