Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN03003324_02332 | Not Available | Positive | 2534991 - 2535983 | 37495.7 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN03003324_02333 | Not Available | Negative | 2536056 - 2536658 | 22677.2 |
| acetyl esterase | SAMN03003324_02334 | Not Available | Negative | 2536661 - 2537620 | 36510.0 |
| nadph:quinone reductase | SAMN03003324_02335 | Not Available | Negative | 2537632 - 2538579 | 34668.6 |
| arac-type dna-binding protein | SAMN03003324_02336 | Not Available | Positive | 2538665 - 2539540 | 33633.3 |
| hypothetical protein | SAMN03003324_02337 | Not Available | Positive | 2539530 - 2540393 | 33342.4 |
| n-6 dna methylase | SAMN03003324_02338 | Not Available | Positive | 2540420 - 2540839 | 16487.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN03003324_02339 | Not Available | Positive | 2540852 - 2541556 | 25067.0 |
| hypothetical protein | SAMN03003324_02340 | Not Available | Positive | 2541567 - 2541695 | 4704.6 |
| hth-type transcriptional regulator / antitoxin higa | SAMN03003324_02341 | Not Available | Negative | 2541940 - 2542299 | 13662.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

