Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02312 | Not Available | Positive | 2514448 - 2514822 | 13819.1 |
| fructokinase | SAMN03003324_02313 | Not Available | Positive | 2514822 - 2515745 | 34391.2 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN03003324_02314 | Not Available | Negative | 2515792 - 2517249 | 55122.6 |
| ribosomal protein s18 acetylase rimi | SAMN03003324_02315 | Not Available | Positive | 2517332 - 2517778 | 17723.1 |
| hypothetical protein | SAMN03003324_02316 | Not Available | Negative | 2517896 - 2518216 | 12394.0 |
| atp-dependent rna helicase rhle | SAMN03003324_02317 | Not Available | Negative | 2518278 - 2519417 | 41970.7 |
| drug resistance transporter, emrb/qaca subfamily | SAMN03003324_02318 | Not Available | Negative | 2519456 - 2521024 | 55280.6 |
| broad specificity phosphatase phoe | SAMN03003324_02319 | Not Available | Positive | 2521227 - 2521760 | 20953.4 |
| hypothetical protein | SAMN03003324_02320 | Not Available | Negative | 2521761 - 2522108 | 13166.0 |
| beta-lactamase | SAMN03003324_02321 | Not Available | Negative | 2522116 - 2522487 | 13680.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

