Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylyltransferase and sulfurtransferase | SAMN03003324_02292 | Not Available | Positive | 2494540 - 2495586 | 38251.5 |
| hypothetical protein | SAMN03003324_02293 | Not Available | Positive | 2495688 - 2497322 | 60353.6 |
| fecr family protein | SAMN03003324_02294 | Not Available | Negative | 2497355 - 2498341 | 37001.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_02295 | Not Available | Negative | 2498338 - 2498904 | 22337.2 |
| outer membrane protein beta-barrel domain-containing protein | SAMN03003324_02296 | Not Available | Negative | 2498946 - 2499518 | 20592.9 |
| hypothetical protein | SAMN03003324_02297 | Not Available | Negative | 2499566 - 2500603 | 37350.8 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN03003324_02298 | Not Available | Positive | 2500757 - 2501632 | 33866.9 |
| hypothetical protein | SAMN03003324_02299 | Not Available | Positive | 2501711 - 2502289 | 22285.3 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN03003324_02300 | Not Available | Positive | 2502276 - 2502701 | 16113.4 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN03003324_02301 | Not Available | Positive | 2502780 - 2504666 | 69480.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

