Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00165 | Not Available | Negative | 176481 - 176801 | 11627.4 |
| small conductance mechanosensitive channel | SAMN03003324_00166 | Not Available | Positive | 176982 - 177794 | 30290.4 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN03003324_00167 | Not Available | Negative | 177801 - 179030 | 43401.2 |
| uridine phosphorylase | SAMN03003324_00168 | Not Available | Negative | 179044 - 179922 | 31918.3 |
| uncharacterized protein, yigz family | SAMN03003324_00169 | Not Available | Negative | 179954 - 180568 | 22850.4 |
| eama-like transporter family protein | SAMN03003324_00170 | Not Available | Negative | 180558 - 181418 | 31293.2 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | SAMN03003324_00171 | Not Available | Negative | 181415 - 182470 | 39232.3 |
| release factor glutamine methyltransferase | SAMN03003324_00172 | Not Available | Positive | 182551 - 183393 | 32047.7 |
| integrase/recombinase xerd | SAMN03003324_00173 | Not Available | Negative | 183390 - 184289 | 33947.2 |
| 3-dehydroquinate dehydratase | SAMN03003324_00174 | Not Available | Positive | 184333 - 184752 | 15288.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

