Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02281 | Not Available | Negative | 2486002 - 2486517 | 18798.7 |
| predicted oxidoreductase | SAMN03003324_02282 | Not Available | Negative | 2486664 - 2487647 | 36630.6 |
| hypothetical protein | SAMN03003324_02283 | Not Available | Positive | 2487818 - 2488150 | 12189.0 |
| protein of unknown function | SAMN03003324_02284 | Not Available | Positive | 2488154 - 2488900 | 28468.1 |
| sulfur carrier protein | SAMN03003324_02286 | Not Available | Positive | 2489249 - 2489452 | 7284.89 |
| hydroxymethylpyrimidine synthase | SAMN03003324_02287 | Not Available | Positive | 2489468 - 2491351 | 70045.4 |
| thiamine-phosphate pyrophosphorylase | SAMN03003324_02288 | Not Available | Positive | 2491335 - 2491967 | 23408.3 |
| thiamine-phosphate diphosphorylase | SAMN03003324_02289 | Not Available | Positive | 2491979 - 2492638 | 23661.6 |
| thiazole synthase | SAMN03003324_02290 | Not Available | Positive | 2492647 - 2493414 | 27295.2 |
| tyrosine lyase thih | SAMN03003324_02291 | Not Available | Positive | 2493407 - 2494519 | 42807.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

