Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 2476089 - 2476164 | Not Available |
| glycosyl hydrolases family 2, tim barrel domain | SAMN03003324_02272 | Not Available | Negative | 2476338 - 2478185 | 69281.6 |
| uncharacterized conserved protein yece, duf72 family | SAMN03003324_02273 | Not Available | Positive | 2478404 - 2479156 | 29193.4 |
| general stress protein 26 | SAMN03003324_02274 | Not Available | Negative | 2479160 - 2479696 | 19684.8 |
| catechol-2,3-dioxygenase | SAMN03003324_02275 | Not Available | Positive | 2479846 - 2480520 | 25854.7 |
| hypothetical protein | SAMN03003324_02276 | Not Available | Negative | 2480608 - 2481096 | 17795.0 |
| d-lactate dehydrogenase | SAMN03003324_02277 | Not Available | Positive | 2481421 - 2482407 | 36263.6 |
| ompa family protein | SAMN03003324_02278 | Not Available | Negative | 2482474 - 2483001 | 19355.3 |
| predicted purr-regulated permease perm | SAMN03003324_02279 | Not Available | Positive | 2483210 - 2484280 | 38442.1 |
| cubico group peptidase, beta-lactamase class c family | SAMN03003324_02280 | Not Available | Negative | 2484292 - 2485767 | 55366.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

