Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator / antitoxin higa | SAMN03003324_02261 | Not Available | Negative | 2468511 - 2468738 | 8797.7 |
| pin domain-containing protein | SAMN03003324_02262 | Not Available | Negative | 2469462 - 2470007 | 20809.1 |
| protein of unknown function | SAMN03003324_02263 | Not Available | Negative | 2470008 - 2470343 | 12400.8 |
| hypothetical protein | SAMN03003324_02264 | Not Available | Negative | 2470364 - 2471257 | 33220.0 |
| protein of unknown function | SAMN03003324_02265 | Not Available | Negative | 2471271 - 2472356 | 42303.4 |
| hypothetical protein | SAMN03003324_02266 | Not Available | Negative | 2472760 - 2473053 | 11396.3 |
| hypothetical protein | SAMN03003324_02267 | Not Available | Negative | 2473063 - 2473809 | 29119.5 |
| hepn domain-containing protein | SAMN03003324_02268 | Not Available | Negative | 2473806 - 2474243 | 16893.6 |
| phage integrase family protein | SAMN03003324_02269 | Not Available | Negative | 2474628 - 2474867 | 8766.91 |
| hypothetical protein | SAMN03003324_02270 | Not Available | Negative | 2475400 - 2475846 | 16945.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

