Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02231 | Not Available | Negative | 2432492 - 2432713 | 8401.22 |
| predicted arabinose efflux permease, mfs family | SAMN03003324_02232 | Not Available | Negative | 2432718 - 2433938 | 45229.7 |
| phosphonoacetate hydrolase | SAMN03003324_02233 | Not Available | Negative | 2434182 - 2434763 | 21846.9 |
| predicted transcriptional regulator ydee, contains arac-type dna-binding domain | SAMN03003324_02234 | Not Available | Positive | 2434949 - 2435401 | 16894.7 |
| alkaline phosphatase | SAMN03003324_02235 | Not Available | Positive | 2435542 - 2436951 | 50750.4 |
| beta-lactamase class a | SAMN03003324_02236 | Not Available | Positive | 2437052 - 2437960 | 33469.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN03003324_02237 | Not Available | Negative | 2437914 - 2439002 | 41843.6 |
| sulfate permease, sulp family | SAMN03003324_02238 | Not Available | Positive | 2439185 - 2440717 | 54881.1 |
| predicted oxidoreductase | SAMN03003324_02239 | Not Available | Negative | 2440790 - 2441833 | 38843.1 |
| two component transcriptional regulator, lyttr family | SAMN03003324_02240 | Not Available | Negative | 2441981 - 2442673 | 26749.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

