Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h dehydrogenase (quinone) | SAMN03003324_02221 | Not Available | Negative | 2422286 - 2423131 | 29599.0 |
| transcriptional regulator, hxlr family | SAMN03003324_02222 | Not Available | Positive | 2423352 - 2423630 | 10658.9 |
| Trna-asp | Not Available | Not Available | Positive | 2423911 - 2423987 | Not Available |
| uncharacterized iron-regulated membrane protein | SAMN03003324_02224 | Not Available | Negative | 2424040 - 2425191 | 43841.7 |
| hypothetical protein | SAMN03003324_02225 | Not Available | Negative | 2426219 - 2426872 | 23536.9 |
| hypothetical protein | SAMN03003324_02226 | Not Available | Negative | 2427012 - 2427944 | 34704.0 |
| asma family protein | SAMN03003324_02227 | Not Available | Positive | 2428038 - 2430467 | 89905.0 |
| hypothetical protein | SAMN03003324_02228 | Not Available | Negative | 2430476 - 2430709 | 9080.38 |
| hypothetical protein | SAMN03003324_02229 | Not Available | Positive | 2430738 - 2431220 | 18173.6 |
| surface antigen | SAMN03003324_02230 | Not Available | Negative | 2431198 - 2432412 | 45776.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

