Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02211 | Not Available | Positive | 2414164 - 2414343 | 6458.76 |
| cubico group peptidase, beta-lactamase class c family | SAMN03003324_02212 | Not Available | Negative | 2414557 - 2416389 | 68844.6 |
| histidine kinase | SAMN03003324_02213 | Not Available | Positive | 2416513 - 2417628 | 42443.4 |
| two component transcriptional regulator, lyttr family | SAMN03003324_02214 | Not Available | Positive | 2417612 - 2418319 | 26939.0 |
| hypothetical protein | SAMN03003324_02215 | Not Available | Negative | 2418429 - 2418605 | 6467.54 |
| hypothetical protein | SAMN03003324_02216 | Not Available | Positive | 2418625 - 2418771 | 5502.8 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN03003324_02217 | Not Available | Positive | 2418858 - 2419685 | 30442.2 |
| arac-type dna-binding protein | SAMN03003324_02218 | Not Available | Positive | 2419901 - 2420800 | 35410.9 |
| transcriptional regulator, hxlr family | SAMN03003324_02219 | Not Available | Negative | 2420847 - 2421197 | 13262.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03003324_02220 | Not Available | Positive | 2421337 - 2422134 | 28172.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

