Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00155 | Not Available | Positive | 166124 - 166471 | 14044.7 |
| glycosyl hydrolase family 63 c-terminal domain-containing protein | SAMN03003324_00156 | Not Available | Positive | 166525 - 169149 | 101024.0 |
| glutamate 5-kinase | SAMN03003324_00157 | Not Available | Positive | 169178 - 170257 | 39321.0 |
| glutamate-5-semialdehyde dehydrogenase | SAMN03003324_00158 | Not Available | Positive | 170295 - 171554 | 45851.3 |
| malate dehydrogenase (quinone) | SAMN03003324_00159 | Not Available | Positive | 171712 - 173220 | 55248.8 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN03003324_00160 | Not Available | Negative | 173210 - 174085 | 34468.9 |
| ktsc domain-containing protein | SAMN03003324_00161 | Not Available | Negative | 174169 - 174369 | 7994.56 |
| lrp/asnc family transcriptional regulator, regulator for asna, asnc and gida | SAMN03003324_00162 | Not Available | Negative | 174412 - 174873 | 17851.9 |
| rna polymerase primary sigma factor | SAMN03003324_00163 | Not Available | Positive | 175099 - 175980 | 33361.7 |
| hypothetical protein | SAMN03003324_00164 | Not Available | Positive | 175984 - 176364 | 15181.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

