Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02161 | Not Available | Positive | 2358448 - 2359380 | 34101.0 |
| hypothetical protein | SAMN03003324_02162 | Not Available | Positive | 2359489 - 2359812 | 11900.6 |
| iron complex outermembrane recepter protein | SAMN03003324_02163 | Not Available | Positive | 2359961 - 2362348 | 89935.1 |
| protein of unknown function | SAMN03003324_02164 | Not Available | Positive | 2362403 - 2363161 | 27609.8 |
| protein of unknown function | SAMN03003324_02165 | Not Available | Positive | 2363186 - 2364109 | 34525.9 |
| protein of unknown function | SAMN03003324_02166 | Not Available | Positive | 2364112 - 2364630 | 19417.3 |
| fr47-like protein | SAMN03003324_02167 | Not Available | Negative | 2364691 - 2365383 | 26210.7 |
| pas fold-containing protein | SAMN03003324_02168 | Not Available | Positive | 2365582 - 2367372 | 67686.0 |
| hypothetical protein | SAMN03003324_02169 | Not Available | Positive | 2367455 - 2367790 | 12153.6 |
| cubico group peptidase, beta-lactamase class c family | SAMN03003324_02170 | Not Available | Negative | 2367845 - 2368930 | 40539.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

