Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_02121 | Not Available | Negative | 2308737 - 2309141 | 15305.7 |
| dna topoisomerase i | SAMN03003324_02122 | Not Available | Negative | 2309221 - 2311809 | 96885.4 |
| glutathione peroxidase | SAMN03003324_02123 | Not Available | Positive | 2312038 - 2312547 | 19150.2 |
| pp_02097 | SAMN03003324_02124 | Not Available | Negative | 2312632 - 2313723 | Not Available |
| alpha-1,2-mannosidase, putative | SAMN03003324_02125 | Not Available | Positive | 2313973 - 2316255 | 86086.5 |
| Trna-lys | Not Available | Not Available | Positive | 2316444 - 2316519 | Not Available |
| putative abc transport system permease protein | SAMN03003324_02127 | Not Available | Positive | 2317365 - 2319749 | 88288.2 |
| hypothetical protein | SAMN03003324_02128 | Not Available | Negative | 2319780 - 2320328 | 20495.3 |
| transcriptional regulator, hxlr family | SAMN03003324_02129 | Not Available | Negative | 2320393 - 2320767 | 14089.1 |
| major facilitator superfamily protein | SAMN03003324_02130 | Not Available | Positive | 2320856 - 2322265 | 51300.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

