Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactokinase | SAMN03003324_00145 | Not Available | Negative | 157356 - 158582 | 45269.5 |
| aldose 1-epimerase | SAMN03003324_00146 | Not Available | Positive | 158662 - 159687 | 37750.3 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN03003324_00147 | Not Available | Positive | 159812 - 160462 | 23719.8 |
| undecaprenyl-diphosphatase | SAMN03003324_00148 | Not Available | Positive | 160489 - 161091 | 21852.5 |
| iron complex outermembrane recepter protein | SAMN03003324_00149 | Not Available | Positive | 161145 - 163007 | 69095.2 |
| hypothetical protein | SAMN03003324_00150 | Not Available | Positive | 163081 - 163797 | 26798.4 |
| hypothetical protein | SAMN03003324_00151 | Not Available | Positive | 163799 - 164107 | 11136.6 |
| gas vesicle protein | SAMN03003324_00152 | Not Available | Negative | 164166 - 164567 | 14299.7 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN03003324_00153 | Not Available | Negative | 164745 - 165209 | 17235.4 |
| pap2 superfamily protein | SAMN03003324_00154 | Not Available | Positive | 165358 - 166095 | 27071.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

