Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN03003324_02081 | Not Available | Positive | 2261480 - 2262676 | 45497.4 |
| hypothetical protein | SAMN03003324_02082 | Not Available | Positive | 2262713 - 2263045 | 12629.9 |
| hypothetical protein | SAMN03003324_02083 | Not Available | Positive | 2263036 - 2263872 | 31437.2 |
| trna dimethylallyltransferase | SAMN03003324_02084 | Not Available | Positive | 2263862 - 2264794 | 35308.9 |
| hypothetical protein | SAMN03003324_02085 | Not Available | Positive | 2265010 - 2265540 | 18582.2 |
| protein of unknown function | SAMN03003324_02086 | Not Available | Positive | 2265873 - 2266415 | 19785.5 |
| citrate synthase | SAMN03003324_02087 | Not Available | Positive | 2266535 - 2267821 | 48328.1 |
| sm-20-related protein | SAMN03003324_02088 | Not Available | Negative | 2267881 - 2268480 | 23146.4 |
| protein of unknown function | SAMN03003324_02089 | Not Available | Negative | 2268550 - 2269671 | 43623.1 |
| concentrative nucleoside transporter, cnt family | SAMN03003324_02090 | Not Available | Negative | 2269679 - 2270944 | 44951.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

