Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-amino-7-oxononanoate synthase | SAMN03003324_02071 | Not Available | Negative | 2249247 - 2250392 | 42513.1 |
| hypothetical protein | SAMN03003324_02072 | Not Available | Negative | 2250416 - 2251027 | 23156.9 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN03003324_02073 | Not Available | Positive | 2251093 - 2252577 | 55944.9 |
| mechanosensitive ion channel | SAMN03003324_02074 | Not Available | Negative | 2252657 - 2255029 | 90080.3 |
| hypothetical protein | SAMN03003324_02075 | Not Available | Negative | 2255067 - 2256209 | 43429.7 |
| secondary thiamine-phosphate synthase enzyme | SAMN03003324_02076 | Not Available | Negative | 2256344 - 2256766 | 15910.1 |
| putative membrane protein | SAMN03003324_02077 | Not Available | Positive | 2256850 - 2257710 | 32893.4 |
| acetoin utilization deacetylase acuc | SAMN03003324_02078 | Not Available | Positive | 2257710 - 2258615 | 33698.6 |
| dna topoisomerase-3 | SAMN03003324_02079 | Not Available | Positive | 2258742 - 2260601 | 69232.4 |
| d-alanine transaminase | SAMN03003324_02080 | Not Available | Negative | 2260623 - 2261462 | 31074.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

