Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN03003324_02051 | Not Available | Positive | 2223901 - 2225307 | 52138.9 |
| multidrug efflux pump subunit acrb | SAMN03003324_02052 | Not Available | Positive | 2225320 - 2228496 | 114963.0 |
| rnd family efflux transporter, mfp subunit | SAMN03003324_02053 | Not Available | Positive | 2228489 - 2229592 | 39522.5 |
| arac-type dna-binding protein | SAMN03003324_02054 | Not Available | Positive | 2229655 - 2230596 | 36313.3 |
| carboxypepd_reg-like domain-containing protein | SAMN03003324_02055 | Not Available | Positive | 2230755 - 2233319 | 98698.8 |
| surface antigen | SAMN03003324_02056 | Not Available | Negative | 2233320 - 2234651 | 50193.2 |
| amino acid abc transporter substrate-binding protein, paat family (tc 3.a.1.3.-) | SAMN03003324_02057 | Not Available | Positive | 2234900 - 2235646 | 28356.0 |
| uncharacterized membrane protein | SAMN03003324_02058 | Not Available | Positive | 2235855 - 2236637 | 28457.5 |
| conserved hypothetical integral membrane protein | SAMN03003324_02059 | Not Available | Positive | 2236732 - 2237988 | 45942.5 |
| hypothetical protein | SAMN03003324_02060 | Not Available | Positive | 2238026 - 2238244 | 8210.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

