Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide-phosphate synthase | SAMN03003324_02021 | Not Available | Positive | 2193737 - 2194576 | 31304.6 |
| iron complex transport system substrate-binding protein | SAMN03003324_02022 | Not Available | Positive | 2194647 - 2195819 | 43393.9 |
| iron complex transport system permease protein | SAMN03003324_02023 | Not Available | Positive | 2195826 - 2196851 | 36381.1 |
| iron complex transport system atp-binding protein | SAMN03003324_02024 | Not Available | Positive | 2196851 - 2197864 | 36820.8 |
| hypothetical protein | SAMN03003324_02025 | Not Available | Positive | 2197927 - 2198784 | 32478.4 |
| na+/h+-dicarboxylate symporter | SAMN03003324_02026 | Not Available | Negative | 2198771 - 2199991 | 43447.9 |
| hypothetical protein | SAMN03003324_02027 | Not Available | Positive | 2200096 - 2201511 | 53936.7 |
| hypothetical protein | SAMN03003324_02028 | Not Available | Positive | 2201598 - 2201807 | 7525.85 |
| protein of unknown function | SAMN03003324_02029 | Not Available | Negative | 2201858 - 2202565 | 25922.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_02030 | Not Available | Positive | 2202794 - 2203357 | 22191.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

