Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase n | SAMN03003324_02001 | Not Available | Negative | 2171327 - 2173837 | 95341.1 |
| fe-s cluster assembly protein sufb | SAMN03003324_02002 | Not Available | Positive | 2174078 - 2175523 | 53724.8 |
| fe-s cluster assembly atp-binding protein | SAMN03003324_02003 | Not Available | Positive | 2175544 - 2176320 | 28897.7 |
| iron-regulated abc transporter permease protein sufd | SAMN03003324_02004 | Not Available | Positive | 2176322 - 2177656 | 50105.4 |
| cysteine desulfurase / selenocysteine lyase | SAMN03003324_02005 | Not Available | Positive | 2177649 - 2178875 | 44851.0 |
| cysteine desulfuration protein sufe | SAMN03003324_02006 | Not Available | Positive | 2178914 - 2179348 | 16291.6 |
| fes assembly suf system protein | SAMN03003324_02007 | Not Available | Positive | 2179345 - 2179656 | 11643.2 |
| predicted transcriptional regulator, arsr family | SAMN03003324_02008 | Not Available | Positive | 2179656 - 2180282 | 23395.2 |
| lipid-binding sylf domain-containing protein | SAMN03003324_02009 | Not Available | Positive | 2180373 - 2181056 | 24115.3 |
| abc-type transport system, involved in lipoprotein release, permease component | SAMN03003324_02010 | Not Available | Negative | 2181132 - 2183552 | 90369.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

