Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-[acyl-carrier-protein] desaturase | SAMN03003324_01990 | Not Available | Negative | 2160246 - 2161226 | 37934.6 |
| imidazolonepropionase | SAMN03003324_01991 | Not Available | Negative | 2161271 - 2162584 | 47764.6 |
| hypothetical protein | SAMN03003324_01993 | Not Available | Negative | 2163055 - 2163312 | 9766.69 |
| protein of unknown function | SAMN03003324_01994 | Not Available | Negative | 2163501 - 2164277 | 28237.4 |
| hypothetical protein | SAMN03003324_01995 | Not Available | Positive | 2164281 - 2164484 | 7825.42 |
| arac-type dna-binding protein | SAMN03003324_01996 | Not Available | Negative | 2164406 - 2164975 | 21825.5 |
| iron complex outermembrane recepter protein | SAMN03003324_01997 | Not Available | Positive | 2165451 - 2168480 | 108534.0 |
| susd family protein | SAMN03003324_01998 | Not Available | Positive | 2168496 - 2170004 | 55835.8 |
| hypothetical protein | SAMN03003324_01999 | Not Available | Positive | 2170108 - 2170914 | 30517.6 |
| protein of unknown function | SAMN03003324_02000 | Not Available | Positive | 2170883 - 2171278 | 14616.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

