Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase | SAMN03003324_01980 | Not Available | Positive | 2144091 - 2145023 | 34363.1 |
| tetratricopeptide repeat-containing protein | SAMN03003324_01981 | Not Available | Positive | 2145282 - 2148344 | 116807.0 |
| tonb dependent receptor | SAMN03003324_01982 | Not Available | Positive | 2148356 - 2150071 | 64432.3 |
| hypothetical protein | SAMN03003324_01983 | Not Available | Positive | 2150125 - 2151558 | 52442.1 |
| biopolymer transport protein exbb | SAMN03003324_01984 | Not Available | Positive | 2151561 - 2152271 | 25793.3 |
| biopolymer transport protein exbd | SAMN03003324_01985 | Not Available | Positive | 2152271 - 2152672 | 14827.2 |
| hypothetical protein | SAMN03003324_01986 | Not Available | Positive | 2152672 - 2153490 | 28382.5 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN03003324_01987 | Not Available | Positive | 2153575 - 2154816 | 45124.4 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN03003324_01988 | Not Available | Positive | 2154885 - 2156549 | 61767.0 |
| methylmalonyl-coa mutase | SAMN03003324_01989 | Not Available | Positive | 2156773 - 2160171 | 126602.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

