Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent lon protease | SAMN03003324_01970 | Not Available | Positive | 2130650 - 2133121 | 92256.2 |
| hypothetical protein | SAMN03003324_01971 | Not Available | Positive | 2133177 - 2134130 | 35378.8 |
| ribosome-associated protein | SAMN03003324_01972 | Not Available | Negative | 2134133 - 2134546 | 15640.0 |
| cytidylate kinase | SAMN03003324_01973 | Not Available | Positive | 2134574 - 2135272 | 26170.2 |
| starch-binding associating with outer membrane | SAMN03003324_01974 | Not Available | Negative | 2135327 - 2136832 | 55768.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_01975 | Not Available | Negative | 2136837 - 2139887 | 111554.0 |
| arac-type dna-binding protein | SAMN03003324_01976 | Not Available | Positive | 2139950 - 2140840 | 33786.8 |
| small subunit ribosomal protein s1 | SAMN03003324_01977 | Not Available | Positive | 2140971 - 2142905 | 71897.3 |
| predicted thiol-disulfide oxidoreductase yuxk, dcc family | SAMN03003324_01978 | Not Available | Negative | 2143023 - 2143418 | 14719.1 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN03003324_01979 | Not Available | Positive | 2143539 - 2144087 | 20887.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

