Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fur family transcriptional regulator, ferric uptake regulator | SAMN03003324_01960 | Not Available | Positive | 2121459 - 2121950 | 19198.9 |
| adenylosuccinate synthetase | SAMN03003324_01961 | Not Available | Positive | 2121990 - 2123267 | 47074.7 |
| para-aminobenzoate synthetase component 1 | SAMN03003324_01962 | Not Available | Positive | 2123338 - 2124609 | 47489.6 |
| peptidase family m48 | SAMN03003324_01963 | Not Available | Negative | 2124647 - 2125474 | 29247.0 |
| glycerol-3-phosphate acyltransferase plsy | SAMN03003324_01964 | Not Available | Negative | 2125518 - 2126171 | 23211.2 |
| nicotinate-nucleotide pyrophosphorylase | SAMN03003324_01965 | Not Available | Negative | 2126175 - 2127017 | 30571.9 |
| protein of unknown function | SAMN03003324_01966 | Not Available | Negative | 2127066 - 2127461 | 14770.7 |
| phosphoglycerate mutase | SAMN03003324_01967 | Not Available | Positive | 2127616 - 2129118 | 54504.5 |
| hypothetical protein | SAMN03003324_01968 | Not Available | Positive | 2129118 - 2129657 | 20391.6 |
| outer membrane lipoprotein | SAMN03003324_01969 | Not Available | Negative | 2129749 - 2130375 | 23529.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

