Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_01950 | Not Available | Positive | 2111922 - 2112308 | 14406.4 |
| ankyrin repeat-containing protein | SAMN03003324_01951 | Not Available | Negative | 2112465 - 2112914 | 16878.3 |
| putative toxin-antitoxin system antitoxin component, tigr02293 family | SAMN03003324_01952 | Not Available | Positive | 2113434 - 2113892 | 16938.5 |
| res domain-containing protein | SAMN03003324_01953 | Not Available | Positive | 2113947 - 2114351 | 15436.4 |
| peroxiredoxin | SAMN03003324_01954 | Not Available | Negative | 2114508 - 2115677 | 42565.9 |
| glutaryl-coa dehydrogenase | SAMN03003324_01955 | Not Available | Negative | 2115780 - 2117141 | 49860.3 |
| bacillithiol biosynthesis deacetylase bshb1 | SAMN03003324_01956 | Not Available | Negative | 2117189 - 2117908 | 26746.9 |
| glutathione peroxidase | SAMN03003324_01957 | Not Available | Negative | 2117950 - 2118447 | 18945.7 |
| protein of unknown function | SAMN03003324_01958 | Not Available | Negative | 2118451 - 2119077 | 24236.4 |
| gtp pyrophosphokinase | SAMN03003324_01959 | Not Available | Positive | 2119188 - 2121395 | 83619.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

