Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_01920 | Not Available | Negative | 2081260 - 2082666 | 53677.8 |
| susd family protein | SAMN03003324_01921 | Not Available | Negative | 2082723 - 2084081 | 51721.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_01922 | Not Available | Negative | 2084091 - 2087615 | 130804.0 |
| fecr family protein | SAMN03003324_01923 | Not Available | Negative | 2087798 - 2088487 | 25844.7 |
| hypothetical protein | SAMN03003324_01924 | Not Available | Negative | 2088587 - 2088970 | 14274.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_01925 | Not Available | Negative | 2089057 - 2089647 | 23168.4 |
| transcriptional regulator, tetr family | SAMN03003324_01926 | Not Available | Negative | 2089762 - 2090346 | 21957.4 |
| hypothetical protein | SAMN03003324_01927 | Not Available | Negative | 2090565 - 2090726 | 6296.31 |
| repeat domain-containing protein | SAMN03003324_01928 | Not Available | Negative | 2090813 - 2092030 | 44380.1 |
| arac-type dna-binding protein | SAMN03003324_01929 | Not Available | Negative | 2092142 - 2092966 | 32085.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

