Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii, delta subunit | SAMN03003324_01890 | Not Available | Negative | 2052765 - 2053790 | 39041.3 |
| type i restriction enzyme r protein n terminus (hsdr_n) | SAMN03003324_01891 | Not Available | Positive | 2053847 - 2054308 | 18255.2 |
| hypothetical protein | SAMN03003324_01892 | Not Available | Negative | 2054410 - 2055117 | 26234.4 |
| hypothetical protein | SAMN03003324_01893 | Not Available | Negative | 2055144 - 2055851 | 25733.7 |
| valyl-trna synthetase | SAMN03003324_01894 | Not Available | Negative | 2056039 - 2058702 | 101707.0 |
| protein n-acetyltransferase, rimj/riml family | SAMN03003324_01895 | Not Available | Negative | 2058750 - 2059244 | 18824.6 |
| hypothetical protein | SAMN03003324_01896 | Not Available | Negative | 2059195 - 2059413 | 8109.84 |
| putative endopeptidase | SAMN03003324_01897 | Not Available | Positive | 2059704 - 2061746 | 76233.6 |
| outer membrane protein | SAMN03003324_01898 | Not Available | Negative | 2061792 - 2062481 | 25149.3 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN03003324_01899 | Not Available | Negative | 2062567 - 2062908 | 13104.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

