Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00124 | Not Available | Negative | 130032 - 130556 | 19804.7 |
| hypothetical protein | SAMN03003324_00125 | Not Available | Positive | 131162 - 131299 | 5307.38 |
| sefir domain-containing protein | SAMN03003324_00126 | Not Available | Positive | 131516 - 131812 | 11392.6 |
| hypothetical protein | SAMN03003324_00127 | Not Available | Positive | 131827 - 131982 | 5960.16 |
| hypothetical protein | SAMN03003324_00128 | Not Available | Positive | 132142 - 133368 | 46304.1 |
| trypsin-like peptidase domain-containing protein | SAMN03003324_00129 | Not Available | Positive | 133365 - 134651 | 47407.1 |
| hypothetical protein | SAMN03003324_00130 | Not Available | Positive | 134644 - 135180 | 21118.3 |
| dna repair exonuclease sbccd atpase subunit | SAMN03003324_00131 | Not Available | Positive | 135167 - 138310 | 120218.0 |
| hypothetical protein | SAMN03003324_00132 | Not Available | Positive | 138680 - 142804 | 160836.0 |
| hypothetical protein | SAMN03003324_00133 | Not Available | Positive | 142817 - 144010 | 45804.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

