Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc carboxypeptidase | SAMN03003324_01869 | Not Available | Negative | 2026811 - 2029378 | 94461.6 |
| ragb/susd domain-containing protein | SAMN03003324_01870 | Not Available | Negative | 2029405 - 2030751 | 49036.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_01871 | Not Available | Negative | 2030767 - 2033808 | 110520.0 |
| peroxiredoxin | SAMN03003324_01872 | Not Available | Negative | 2034168 - 2035160 | 36881.3 |
| glycerol uptake facilitator protein | SAMN03003324_01874 | Not Available | Negative | 2035469 - 2036194 | 25152.1 |
| glycerol kinase | SAMN03003324_01875 | Not Available | Negative | 2036242 - 2037750 | 55012.7 |
| glycerol-3-phosphate dehydrogenase | SAMN03003324_01876 | Not Available | Negative | 2037760 - 2039343 | 58651.6 |
| uncharacterized domain 1-containing protein | SAMN03003324_01877 | Not Available | Negative | 2039373 - 2039921 | 20228.7 |
| tspo and mbr related proteins | SAMN03003324_01878 | Not Available | Positive | 2040040 - 2040534 | 18620.5 |
| nte family protein | SAMN03003324_01879 | Not Available | Positive | 2040558 - 2042876 | 87585.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

