Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN03003324_01859 | Not Available | Positive | 2017295 - 2018656 | 51151.7 |
| hypothetical protein | SAMN03003324_01860 | Not Available | Positive | 2018822 - 2019313 | 18577.3 |
| putative membrane protein | SAMN03003324_01861 | Not Available | Positive | 2019335 - 2020261 | 35321.3 |
| Trna-arg | Not Available | Not Available | Positive | 2020516 - 2020587 | Not Available |
| hypothetical protein | SAMN03003324_01863 | Not Available | Positive | 2021209 - 2021748 | 20829.1 |
| hypothetical protein | SAMN03003324_01864 | Not Available | Negative | 2022186 - 2022686 | 18642.6 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN03003324_01865 | Not Available | Negative | 2022811 - 2024760 | 72868.2 |
| hypothetical protein | SAMN03003324_01866 | Not Available | Positive | 2025005 - 2025316 | 11421.7 |
| uncharacterized conserved protein, contains hepn domain | SAMN03003324_01867 | Not Available | Positive | 2025303 - 2025644 | 13116.8 |
| hypothetical protein | SAMN03003324_01868 | Not Available | Positive | 2025703 - 2026560 | 32877.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

