Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN03003324_01849 | Not Available | Positive | 2005720 - 2007012 | 49011.5 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN03003324_01850 | Not Available | Positive | 2007047 - 2008120 | 39374.4 |
| cobalt-zinc-cadmium resistance protein czca | SAMN03003324_01851 | Not Available | Positive | 2008145 - 2011294 | 116373.0 |
| hypothetical protein | SAMN03003324_01852 | Not Available | Positive | 2011519 - 2011767 | 9502.01 |
| uncharacterized membrane protein | SAMN03003324_01853 | Not Available | Positive | 2011767 - 2012462 | 25980.3 |
| hypothetical protein | SAMN03003324_01854 | Not Available | Negative | 2012459 - 2012947 | 17846.3 |
| hypothetical protein | SAMN03003324_01855 | Not Available | Positive | 2013071 - 2014165 | 39943.9 |
| magnesium transporter | SAMN03003324_01856 | Not Available | Negative | 2014270 - 2015643 | 50728.4 |
| hypothetical protein | SAMN03003324_01857 | Not Available | Negative | 2015894 - 2016430 | 20295.5 |
| two component transcriptional regulator, winged helix family | SAMN03003324_01858 | Not Available | Positive | 2016517 - 2017311 | 30170.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

