Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_01829 | Not Available | Positive | 1986065 - 1986490 | 16096.7 |
| hypothetical protein | SAMN03003324_01830 | Not Available | Positive | 1986487 - 1987161 | 24399.3 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN03003324_01831 | Not Available | Negative | 1987181 - 1988551 | 51831.2 |
| d-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain | SAMN03003324_01832 | Not Available | Negative | 1988544 - 1988999 | 16603.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN03003324_01833 | Not Available | Negative | 1989084 - 1990142 | 39983.4 |
| pas/pac sensor signal transduction histidine kinase | SAMN03003324_01834 | Not Available | Negative | 1990139 - 1991335 | 45177.3 |
| hypothetical protein | SAMN03003324_01835 | Not Available | Positive | 1991471 - 1993309 | 69167.2 |
| predicted outer membrane protein | SAMN03003324_01836 | Not Available | Negative | 1993419 - 1994042 | 22617.1 |
| protein of unknown function | SAMN03003324_01837 | Not Available | Positive | 1994207 - 1995055 | 31360.8 |
| transporter, sss family | SAMN03003324_01838 | Not Available | Negative | 1995112 - 1996812 | 62489.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

