Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN03003324_01819 | Not Available | Negative | 1974522 - 1975742 | 44185.2 |
| lysr family transcriptional regulator, cyn operon transcriptional activator | SAMN03003324_01820 | Not Available | Positive | 1975838 - 1976746 | 33949.9 |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase | SAMN03003324_01821 | Not Available | Negative | 1976735 - 1977385 | 23697.2 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN03003324_01822 | Not Available | Negative | 1977468 - 1978757 | 48409.3 |
| cu+-exporting atpase | SAMN03003324_01823 | Not Available | Positive | 1978875 - 1981262 | 88653.6 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN03003324_01824 | Not Available | Positive | 1981259 - 1981447 | 7096.54 |
| cytochrome c oxidase cbb3-type subunit i/ii | SAMN03003324_01825 | Not Available | Positive | 1981516 - 1983627 | 80065.8 |
| hypothetical protein | SAMN03003324_01826 | Not Available | Positive | 1983643 - 1983849 | 7968.61 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN03003324_01827 | Not Available | Positive | 1983794 - 1984663 | 32171.2 |
| cytochrome c oxidase accessory protein fixg | SAMN03003324_01828 | Not Available | Positive | 1984665 - 1986062 | 53114.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

