Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_01809 | Not Available | Positive | 1965664 - 1966254 | 22127.1 |
| protein of unknown function | SAMN03003324_01810 | Not Available | Negative | 1966222 - 1967010 | 30145.0 |
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | SAMN03003324_01811 | Not Available | Negative | 1967276 - 1968292 | 37816.2 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | SAMN03003324_01812 | Not Available | Negative | 1968296 - 1969624 | 48727.2 |
| nadh dehydrogenase | SAMN03003324_01813 | Not Available | Negative | 1969718 - 1971031 | 48676.4 |
| hypothetical protein | SAMN03003324_01814 | Not Available | Positive | 1971151 - 1971654 | 19261.0 |
| protein of unknown function, duf481 | SAMN03003324_01815 | Not Available | Negative | 1971675 - 1972412 | 28385.4 |
| dna-binding transcriptional regulator, fadr family | SAMN03003324_01816 | Not Available | Positive | 1972634 - 1973287 | 24672.8 |
| hypothetical protein | SAMN03003324_01817 | Not Available | Positive | 1973293 - 1974126 | 28824.3 |
| uncharacterized membrane protein | SAMN03003324_01818 | Not Available | Positive | 1974130 - 1974525 | 14099.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

