Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN03003324_01799 | Not Available | Negative | 1957820 - 1959043 | 44889.4 |
| hypothetical protein | SAMN03003324_01800 | Not Available | Negative | 1959131 - 1959310 | 6465.09 |
| hypothetical protein | SAMN03003324_01801 | Not Available | Negative | 1959448 - 1959756 | 11108.4 |
| ketosteroid isomerase homolog | SAMN03003324_01802 | Not Available | Negative | 1960010 - 1960453 | 16618.0 |
| prephenate dehydrogenase (nadp+) | SAMN03003324_01803 | Not Available | Positive | 1960487 - 1961749 | 47239.8 |
| thioredoxin | SAMN03003324_01804 | Not Available | Negative | 1961797 - 1962093 | 11030.6 |
| sugar phosphate permease | SAMN03003324_01805 | Not Available | Negative | 1962305 - 1963402 | 39525.6 |
| g/u mismatch-specific uracil-dna glycosylase | SAMN03003324_01806 | Not Available | Negative | 1963476 - 1963976 | 19029.8 |
| hypothetical protein | SAMN03003324_01807 | Not Available | Positive | 1964094 - 1964927 | 31289.6 |
| putative acetyltransferase | SAMN03003324_01808 | Not Available | Negative | 1965016 - 1965507 | 18282.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

