Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dephospho-coa kinase | SAMN03003324_01789 | Not Available | Negative | 1950248 - 1950844 | 21893.4 |
| ybbr domain-containing protein | SAMN03003324_01790 | Not Available | Negative | 1950854 - 1951801 | 36700.9 |
| preprotein translocase subunit yajc | SAMN03003324_01791 | Not Available | Negative | 1951877 - 1952194 | 11538.5 |
| protein of unknown function | SAMN03003324_01792 | Not Available | Negative | 1952219 - 1952719 | 17372.7 |
| nusb antitermination factor | SAMN03003324_01793 | Not Available | Negative | 1952712 - 1953662 | 37096.9 |
| leucine dehydrogenase | SAMN03003324_01794 | Not Available | Negative | 1953697 - 1954833 | 41007.7 |
| atp-binding cassette, subfamily b | SAMN03003324_01795 | Not Available | Positive | 1954899 - 1956689 | 68065.1 |
| protein of unknown function | SAMN03003324_01796 | Not Available | Positive | 1956759 - 1957085 | 12927.9 |
| hypothetical protein | SAMN03003324_01797 | Not Available | Negative | 1957155 - 1957556 | 14644.5 |
| hypothetical protein | SAMN03003324_01798 | Not Available | Positive | 1957688 - 1957819 | 4870.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

