Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00115 | Not Available | Positive | 120032 - 120247 | 8321.12 |
| phage integrase family protein | SAMN03003324_00116 | Not Available | Positive | 120580 - 120885 | 11367.0 |
| eco57i restriction-modification methylase | SAMN03003324_00117 | Not Available | Negative | 121676 - 124615 | 113884.0 |
| hypothetical protein | SAMN03003324_00118 | Not Available | Positive | 125728 - 126717 | 38345.9 |
| hypothetical protein | SAMN03003324_00119 | Not Available | Negative | 126775 - 127026 | 9180.87 |
| hypothetical protein | SAMN03003324_00120 | Not Available | Positive | 127628 - 127909 | 10849.3 |
| hypothetical protein | SAMN03003324_00121 | Not Available | Negative | 127915 - 128202 | 11147.2 |
| hypothetical protein | SAMN03003324_00122 | Not Available | Positive | 128257 - 128886 | 24473.8 |
| putative phage abortive infection protein | SAMN03003324_00123 | Not Available | Positive | 128957 - 129451 | 19983.1 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 128965 - 129076 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

