Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna processing protein | SAMN03003324_01759 | Not Available | Negative | 1920996 - 1922114 | 40314.2 |
| 16s rrna m(7)g-527 methyltransferase | SAMN03003324_01760 | Not Available | Negative | 1922195 - 1922827 | 24019.8 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN03003324_01761 | Not Available | Negative | 1922818 - 1923963 | 43415.4 |
| pp_01739 | SAMN03003324_01762 | Not Available | Positive | 1924072 - 1925202 | Not Available |
| lipopolysaccharide export system permease protein | SAMN03003324_01763 | Not Available | Positive | 1925203 - 1926306 | 41777.4 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN03003324_01764 | Not Available | Positive | 1926307 - 1927212 | 33834.2 |
| hypothetical protein | SAMN03003324_01765 | Not Available | Positive | 1927791 - 1930604 | 106128.0 |
| protein of unknown function | SAMN03003324_01766 | Not Available | Positive | 1930608 - 1930919 | 11938.5 |
| o-succinylhomoserine sulfhydrylase | SAMN03003324_01767 | Not Available | Negative | 1931017 - 1932189 | 43231.5 |
| putative redox protein | SAMN03003324_01768 | Not Available | Negative | 1932192 - 1932611 | 15510.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

