Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_01739 | Not Available | Positive | 1898085 - 1899095 | 37309.3 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN03003324_01740 | Not Available | Negative | 1899119 - 1900585 | 55854.2 |
| outer membrane protein beta-barrel domain-containing protein | SAMN03003324_01741 | Not Available | Positive | 1900970 - 1901578 | 21611.6 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN03003324_01742 | Not Available | Negative | 1901661 - 1904228 | 97928.0 |
| polysaccharide deacetylase | SAMN03003324_01743 | Not Available | Positive | 1904263 - 1905192 | 35089.9 |
| hypothetical protein | SAMN03003324_01744 | Not Available | Negative | 1905257 - 1905709 | 16721.8 |
| nitroreductase | SAMN03003324_01745 | Not Available | Negative | 1905715 - 1906293 | 22105.6 |
| atpase components of abc transporters with duplicated atpase domains | SAMN03003324_01746 | Not Available | Positive | 1906494 - 1908116 | 61328.7 |
| hypothetical protein | SAMN03003324_01747 | Not Available | Positive | 1908213 - 1908401 | 6944.12 |
| putative abc transport system atp-binding protein | SAMN03003324_01748 | Not Available | Positive | 1908530 - 1909165 | 23622.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

