Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN03003324_01709 | Not Available | Negative | 1867797 - 1868357 | 21320.7 |
| hypothetical protein | SAMN03003324_01710 | Not Available | Positive | 1868463 - 1869479 | 36593.0 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN03003324_01711 | Not Available | Positive | 1869481 - 1870059 | 22318.1 |
| hypothetical protein | SAMN03003324_01712 | Not Available | Negative | 1870119 - 1870847 | 26629.8 |
| hypothetical protein | SAMN03003324_01713 | Not Available | Negative | 1870856 - 1871761 | 32695.7 |
| heat repeat-containing protein | SAMN03003324_01714 | Not Available | Negative | 1871773 - 1872609 | 30474.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_01715 | Not Available | Negative | 1872602 - 1873162 | 21555.6 |
| sodium/proton antiporter, cpa1 family (tc 2.a.36) | SAMN03003324_01716 | Not Available | Positive | 1873348 - 1874922 | 57900.0 |
| abc-type transport system, involved in lipoprotein release, permease component | SAMN03003324_01717 | Not Available | Positive | 1875113 - 1877485 | 87488.1 |
| hypothetical protein | SAMN03003324_01718 | Not Available | Positive | 1877564 - 1878499 | 36660.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

