Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter, mfp subunit | SAMN03003324_01639 | Not Available | Positive | 1780398 - 1781483 | 39128.3 |
| multidrug efflux pump subunit acrb | SAMN03003324_01640 | Not Available | Positive | 1781573 - 1784677 | 114558.0 |
| outer membrane protein tolc | SAMN03003324_01641 | Not Available | Positive | 1784694 - 1785986 | 47700.0 |
| hypothetical protein | SAMN03003324_01642 | Not Available | Positive | 1786013 - 1786177 | 6211.88 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN03003324_01643 | Not Available | Negative | 1786241 - 1786957 | 27526.4 |
| galactose-1-phosphate uridylyltransferase, family 1 | SAMN03003324_01644 | Not Available | Positive | 1787071 - 1787475 | 15246.9 |
| galactokinase | SAMN03003324_01645 | Not Available | Positive | 1787502 - 1788689 | 43655.2 |
| sialate o-acetylesterase | SAMN03003324_01646 | Not Available | Positive | 1788873 - 1790861 | 73157.7 |
| small-conductance mechanosensitive channel | SAMN03003324_01647 | Not Available | Negative | 1790871 - 1793357 | 93287.9 |
| hypothetical protein | SAMN03003324_01648 | Not Available | Positive | 1793434 - 1794282 | 31078.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

