Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN03003324_01629 | Not Available | Negative | 1767561 - 1768853 | 47334.7 |
| cobalt-zinc-cadmium resistance protein czca | SAMN03003324_01630 | Not Available | Negative | 1768840 - 1771968 | 115123.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN03003324_01631 | Not Available | Negative | 1771990 - 1773096 | 40516.9 |
| signal transduction histidine kinase | SAMN03003324_01632 | Not Available | Negative | 1773287 - 1774681 | 52253.7 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN03003324_01633 | Not Available | Negative | 1774694 - 1775374 | 26285.0 |
| selenocysteine lyase/cysteine desulfurase | SAMN03003324_01634 | Not Available | Negative | 1775419 - 1776591 | 43669.1 |
| carboxypepd_reg-like domain-containing protein | SAMN03003324_01635 | Not Available | Positive | 1776738 - 1777979 | 46984.5 |
| hypothetical protein | SAMN03003324_01636 | Not Available | Positive | 1777983 - 1778354 | 14308.9 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN03003324_01637 | Not Available | Positive | 1778524 - 1779582 | 40928.0 |
| transcriptional regulator, tetr family | SAMN03003324_01638 | Not Available | Positive | 1779754 - 1780341 | 22529.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

